DVsc reference Databases Notes DVsc reference Databases contain human reference database and virus reference database. The human reference database integrates human reference genomes with the version of GRCh38 (hg38) and human mitochondrion genome. The virus reference database integrates viruSITE and NCBI Refseq database, and contains 14698 viral segments from 11556 different viruses in total. DVsc annotation database Notes DVsc annotation database is the annotation of the virus reference database, which is obtained from the RefSeq entries modified by viruSITE, ViralZone, NCBI Taxonomy, and PubMed. DVsc pipline Notes We provide the source code for the pipeline below the page. For large raw data, we recommend downloading the source code and performing local analysis. Please refer to the FAQ for specific usage instructions.

Download the reference databases

Human reference database: HomoDB
Virus reference database: VirusDB

Download the annotation databases

Virus annotation databases: VirusannoDB

Download the demo cases

Demo case of bulk RNAseq: demobulk.fastq
Demo case of single-cell RNAseq: demosc_1.fastq; demosc_2.fastq

Download the software source code of the pipline

Software environment: DVsc environment
Software source code: DVsc pipeline